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Pandas: merge (join) two data frames on multiple columns

python
pandas
merge
dataframe
Anton ShumikhinbyAnton Shumikhin·Aug 7, 2024
TLDR

To merge two DataFrames on multiple keys with pd.merge(), utilize the on parameter:

merged_df = pd.merge(df1, df2, on=['Key1', 'Key2'])

Voilà! This synchronizes rows for columns 'Key1' and 'Key2' in both DataFrames.

Feeling adventurous? Play with merge keys

Ever felt like the column names in your dataframes were two peas in a pod but not quite identical? Fear not! pd.merge() lets you elegantly handle such situations:

merged_df = pd.merge(df1, df2, left_on=['df1_key1', 'df1_key2'], right_on=['df2_key1', 'df2_key2'])

This calls on the left_on and right_on parameters, allowing you to specify slightly dissimilar column names representing the same data.

Pick the right 'how'

how parameter is your ace in the hole while deciding what type of merge you desire. Let me show you how:

# Left join left_joined_df = pd.merge(df1, df2, on=['Key1', 'Key2'], how='left') # All from left, and matchy-matchy from right # Right join right_joined_df = pd.merge(df1, df2, on=['Key1', 'Key2'], how='right') # Like my ex, it's all about the right one # Inner join inner_joined_df = pd.merge(df1, df2, on=['Key1', 'Key2'], how='inner') # It's a match! Keys in both DataFrames # Outer join outer_joined_df = pd.merge(df1, df2, on=['Key1', 'Key2'], how='outer') # Who said you can't have it all?

Pick your how poison. Select the method that best serves your cause!

Indexes playing hopscotch? Reset 'em!

It's mostly rare, but essential when indexes are the life and soul of your dataframes but aren't exactly seeing eye to eye. Say hello to reset_index();

df1.reset_index(inplace=True) df2.reset_index(inplace=True) merged_df = pd.merge(df1, df2, on=['Key1', 'Key2'])

Consider this a neat solution to prevent an information crisis and align non-identical indexes!

In a perfect (column) world nothing goes wrong, this ain't one!

Ensure column data types and column names are in harmony. Here are a few tricks up my sleeve:

  • df.dtypes tells you data types.
  • df.columns unveils column names.
  • Same order for left_on & right_on reduces chances of panic attacks later.

Remember, merging is a match made in heaven, if the columns agree.

Frequent issues that cause chain reaction!

Regular hiccups and their remedies include:

  • KeyError: Use lists, not strings for on, left_on, or right_on and keep 'em errors at bay.
  • Different column names: Use left_on and right_on like magnets to column names.
  • Dubious columns after merge: Call upon the suffixes parameter to rescue & rename identical column names.

Test runs are a quick and painless way to address issues early on.