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Converting a Pandas GroupBy output from Series to DataFrame

python
pandas
dataframe
groupby
Anton ShumikhinbyAnton Shumikhin·Oct 19, 2024
TLDR

Take a GroupBy Series and convert it into a DataFrame by coupling to_frame() and reset_index(). The former changes the Series to a DataFrame, whereas the latter modifies the index into columns, neatly presenting the groups and their combined values.

df = groupby_series.to_frame('value_column').reset_index()

In this instance, groupby_series contains your cumulative data. Switch 'value_column' to the desired column name for the assembled values in the new DataFrame.

GroupBy internals and DataFrame transformation

Keep data structure

Prevent hierarchical indices by setting as_index=False during the grouping:

df = original_df.groupby(['Name', 'City'], as_index=False).size()

Directly acquire a flat DataFrame structure without additional index manipulation.

Counting instances

Use this all-inclusive pattern to count instances:

df = original_df.groupby(['Name', 'City']).size().reset_index(name='Count')

This long-winded pattern is ideal for finding numbers of occurrences of combinations in your dataset, providing a distinct Count column for analysis.

About NaN values

Be mindful that .size() accounts for NaN values, which can be impactful, contingent on your data cleanliness. Conversely, .count() excludes NaN values:

df = original_df.groupby(['Name', 'City']).count().reset_index()

Custom aggregations

If your aggregation isn't a simple count, apply your custom aggregation with .agg():

df = original_df.groupby(['Name', 'City']).agg({'Sales': 'sum'}).reset_index()

This allows for operations like sum, mean, median, or custom functions.

Advanced usage and precautions

Maintain clarity with naming

After grouping, maintain naming consistency by applying .add_suffix('_grouped'):

df = df.add_suffix('_grouped')

This separates your grouped columns and ensures clarity when working with the new DataFrame.

Avoid empty data frames

Be diligent when converting groupby objects to avoid empty data frames. Always check if your GroupBy operations discard all your data, for example, through strict conditions.

Condition: pandas version

The behaviour of GroupBy and related functions sometimes changes between pandas versions. Ensure to check your pandas version and read the release notes to avoid surprises.

Example Code

import pandas as pd # Pretend to have friends: df = pd.DataFrame({'Name': ['Alice', 'Bob', 'Alice'], 'City': ['NY', 'LA', 'NY'], 'Sales': [100, 200, 150]}) # Group by your "friends" and their imaginary "sales": grouped = df.groupby(['Name', 'City']).agg({'Sales': 'sum'}) # Then magically transform them into data rows: result = grouped.reset_index()

Organizing GroupBy results

Remember to organize and simplify data after GroupBy:

df_sorted = df.sort_values('Sales_grouped', ascending=False)

Becoming a pandas GroupBy Guru

Multi-level aggregations

A one-hit wonder is never enough, go beyond the basics: apply multi-level aggregations with .agg():

df = original_df.groupby(['Name', 'City']).agg(Sales_sum=('Sales', 'sum'), Sales_avg=('Sales', 'mean')).reset_index()

Identifying Duplicates

Some friends are clones. Keep an eye on duplicates. Ensure your grouping keys are unique or handle duplicates with .drop_duplicates() before you start counting to avoid inflating their egos.

Light-weight grouping

Don't be a data hoarder. Group only the necessary columns to improve performance with big datasets:

df = original_df[['Name', 'City', 'Sales']].groupby(['Name', 'City']).size().reset_index(name='Count')